Salmon¶
Salmon is a wicked-fast program to produce a highly-accurate, transcript-level quantification estimate from RNA-seq data.
https://github.com/COMBINE-lab/salmon
Available modules¶
The overview below shows which Salmon installations are available per target architecture in EESSI, ordered based on software version (new to old).
To start using Salmon, load one of these modules using a module load command like:
(This data was automatically generated on Fri, 06 Feb 2026 at 13:12:13 UTC)
| aarch64/generic | aarch64/a64fx | aarch64/neoverse_n1 | aarch64/neoverse_v1 | aarch64/nvidia/grace | x86_64/generic | x86_64/amd/zen2 | x86_64/amd/zen3 | x86_64/amd/zen4 | x86_64/intel/cascadelake | x86_64/intel/haswell | x86_64/intel/icelake | x86_64/intel/sapphirerapids | x86_64/intel/skylake_avx512 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Salmon/1.10.3-GCC-12.3.0 | x | x | x | x | x | x | x | x | x | x | x | x | x | x |